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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928176.1_cds_XP_016475819.1_67713
CDS Infomation

[gene=LOC107797437] [db_xref=GeneID:107797437] [protein=probable E3 ubiquitin-protein ligase LOG2] [protein_id=XP_016475819.1] [location=complement(join(2862..2978,3219..3717,5374..5855))] [gbkey=CDS]
Sequence

ATGGGTAATATGGGAAGCAGTGGTGTGAACGGCCGGCGACGGAGCAGTAGCCGGAGGAGC
CACCCACCACCGCCACCGCCACCACAACCGCCGCAGCCGGAGATAAGCGCGAACCGTTAC
GTGTTCGCGGCGGCAACGCCTTATCCTGCACAATACCCAAACCCTAATGCTCCGCCGTAT
TATCAATACCCGGGTTACTATCCGCCACCGCCGCCGGCGATGCCGGTGCCGTTACCGGCT
CCATATGATCATCATCATAGGATGGACAATCACCCGGGTCATGCTAATTGGGTTAACGGG
CCGGGTCGGTACCCATGTGGACCTATGATGCCTCCGCCTGCTCCATATGTGGAGCATCAA
AAAGCTGTGACAATAAGAAATGATGTTAATTTGAAGAAGGAGACTCTAAGGATTGAGCCT
GATGAAGATAACCCTGGCAAATACCTTGTGGCTTTCACGTTTGATGCCACTGTTCCTGGG
AGCATGACTGTCATTTTCTTTGCGAAAGAAGGTGAAGATTGTTGCTTGACTCCTATGAAG
GAAAGCGTGCTTCCGCCAGTAACTTTTGAGTTTCAAAAAGGTTTAGCTCAGAAGTTTAGG
CAACCCTCCGGAACCGGCATTGATCTTTCAATGTTTGAAGAAGCAGAATTGTCCAAAGAT
GGCGAGGCGGATGTGTATCCACTTGCTGTTAAGGCGGAGGCATCGCCAGATAGTCAAAGT
GGATCAGAGGACGGGAGTGCAGCGTCAGGGTTCACTAATTCACAGATTACTCAAGCAATT
TTCGAAAAGGACAAAGGTGAGTACCATGTTAGGGTGGTGAAGCAAATCCTCTGGGTCAAT
GGCATGAGGTATGAATTGCAAGAGATCTATGGTATTGGTAATTCAGTTGAAAGCGACTTC
GATGGAAATGATCCTGGGAAAGAATGTGTGATATGCCTCTCTGAACCTCGGGACACTACT
GTACTTCCATGTCGGCACATGTGTATGTGCAGTGGATGTGCAAAGGTTTTGAGGTTCCAG
ACAAATCGCTGTCCTATTTGTCGACAGCCAGTTGAGCGCCTTTTGGAGATCAAGGTCAGC
GAAGGTGCTGAAGAGTAA

Peptide Sequence

PEP ID

XP_016475819.1
PEP Infomation

PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Nicotiana tabacum]
Sequence

MGNMGSSGVNGRRRSSSRRSHPPPPPPPQPPQPEISANRYVFAAATPYPAQYPNPNAPPY
YQYPGYYPPPPPAMPVPLPAPYDHHHRMDNHPGHANWVNGPGRYPCGPMMPPPAPYVEHQ
KAVTIRNDVNLKKETLRIEPDEDNPGKYLVAFTFDATVPGSMTVIFFAKEGEDCCLTPMK
ESVLPPVTFEFQKGLAQKFRQPSGTGIDLSMFEEAELSKDGEADVYPLAVKAEASPDSQS
GSEDGSAASGFTNSQITQAIFEKDKGEYHVRVVKQILWVNGMRYELQEIYGIGNSVESDF
DGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVS
EGAEE

Transcript Sequence

Gene sequence data has not been registered.